About: SimTandem: Similarity Search in Tandem Mass Spectra     Goto   Sponge   NotDistinct   Permalink

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Description
  • SimTandem is a tool for fast identification of protein and peptide sequences from tandem mass spectra. The identification is based on similarity search of spectra captured by a tandem mass spectrometer in databases of theoretical mass spectra generated from databases of known protein sequences. Since the number of protein sequences in the databases grows rapidly and a sequential scan over the entire database of spectra is time-consuming, the non-metric access methods are employed as the database indexing techniques. SimTandem is based on a previously proposed method and is freely available at http://www.simtandem.org or http://www.siret.cz/simtandem.
  • SimTandem is a tool for fast identification of protein and peptide sequences from tandem mass spectra. The identification is based on similarity search of spectra captured by a tandem mass spectrometer in databases of theoretical mass spectra generated from databases of known protein sequences. Since the number of protein sequences in the databases grows rapidly and a sequential scan over the entire database of spectra is time-consuming, the non-metric access methods are employed as the database indexing techniques. SimTandem is based on a previously proposed method and is freely available at http://www.simtandem.org or http://www.siret.cz/simtandem. (en)
Title
  • SimTandem: Similarity Search in Tandem Mass Spectra
  • SimTandem: Similarity Search in Tandem Mass Spectra (en)
skos:prefLabel
  • SimTandem: Similarity Search in Tandem Mass Spectra
  • SimTandem: Similarity Search in Tandem Mass Spectra (en)
skos:notation
  • RIV/00216208:11320/12:10124005!RIV13-GA0-11320___
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • P(GAP202/11/0968), P(GD201/09/H057), S
http://linked.open...iv/cisloPeriodika
  • 7404
http://linked.open...vai/riv/dodaniDat
http://linked.open...aciTvurceVysledku
http://linked.open.../riv/druhVysledku
http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 167914
http://linked.open...ai/riv/idVysledku
  • RIV/00216208:11320/12:10124005
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • SimTandem; non-metric access methods; similarity search; tandem mass spectrometry; protein sequences identi cation (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...odStatuVydavatele
  • DE - Spolková republika Německo
http://linked.open...ontrolniKodProRIV
  • [71D4B917EE4E]
http://linked.open...i/riv/nazevZdroje
  • Lecture Notes in Computer Science
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...vavai/riv/projekt
http://linked.open...UplatneniVysledku
http://linked.open...v/svazekPeriodika
  • 2012
http://linked.open...iv/tvurceVysledku
  • Novák, Jiří
  • Skopal, Tomáš
  • Hoksza, David
  • Galgonek, Jakub
issn
  • 0302-9743
number of pages
http://bibframe.org/vocab/doi
  • 10.1007/978-3-642-32153-5_18
http://localhost/t...ganizacniJednotka
  • 11320
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