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  • Phylogenetic relationships in the green algal phylum Chlorophyta have long been subject to debate, especially at higher taxonomic ranks (order, class). The relationships among three traditionally defined and well-studied classes, Chlorophyceae, Trebouxiophyceae, and Ulvophyceae are of particular interest, as these groups are species-rich and ecologically important worldwide. Different phylogenetic hypotheses have been proposed over the past two decades and the monophyly of the individual classes has been disputed on occasion. Our study seeks to test these hypotheses by combining high throughput sequencing data from the chloroplast genome with increased taxon sampling. Our results suggest that while many of the deep relationships are still problematic to resolve, the classes Trebouxiophyceae and Ulvophyceae are likely not monophyletic as currently defined. Our results also support relationships among several trebouxiophycean taxa that were previously unresolved. Finally, we propose that the common term for the grouping of the three classes, %22UTC clade,%22 be replaced with the term %22core Chlorophyta%22 for the well-supported clade containing Chlorophyceae, taxa belonging to Ulvophyceae and Trebouxiophyceae, and the classes Chlorodendrophyceae and Pedinophyceae.
  • Phylogenetic relationships in the green algal phylum Chlorophyta have long been subject to debate, especially at higher taxonomic ranks (order, class). The relationships among three traditionally defined and well-studied classes, Chlorophyceae, Trebouxiophyceae, and Ulvophyceae are of particular interest, as these groups are species-rich and ecologically important worldwide. Different phylogenetic hypotheses have been proposed over the past two decades and the monophyly of the individual classes has been disputed on occasion. Our study seeks to test these hypotheses by combining high throughput sequencing data from the chloroplast genome with increased taxon sampling. Our results suggest that while many of the deep relationships are still problematic to resolve, the classes Trebouxiophyceae and Ulvophyceae are likely not monophyletic as currently defined. Our results also support relationships among several trebouxiophycean taxa that were previously unresolved. Finally, we propose that the common term for the grouping of the three classes, %22UTC clade,%22 be replaced with the term %22core Chlorophyta%22 for the well-supported clade containing Chlorophyceae, taxa belonging to Ulvophyceae and Trebouxiophyceae, and the classes Chlorodendrophyceae and Pedinophyceae. (en)
Title
  • New phylogenetic hypotheses for the core Chlorophyta based on chloroplast sequence data
  • New phylogenetic hypotheses for the core Chlorophyta based on chloroplast sequence data (en)
skos:prefLabel
  • New phylogenetic hypotheses for the core Chlorophyta based on chloroplast sequence data
  • New phylogenetic hypotheses for the core Chlorophyta based on chloroplast sequence data (en)
skos:notation
  • RIV/00216208:11310/14:10293149!RIV15-MSM-11310___
http://linked.open...avai/riv/aktivita
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  • 32468
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  • RIV/00216208:11310/14:10293149
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • Viridiplantae; phylogenomics; molecular systematic; multi-genephylogeny; green algae; fast site removal; Chlorophyta; chloroplast DNA (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...odStatuVydavatele
  • CH - Švýcarská konfederace
http://linked.open...ontrolniKodProRIV
  • [92499EE878E8]
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  • Frontiers in ecology and evolution
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http://linked.open...UplatneniVysledku
http://linked.open...v/svazekPeriodika
  • neuveden
http://linked.open...iv/tvurceVysledku
  • Škaloud, Pavel
  • Lewis, Louise A.
  • Leliaert, Frederik
  • Cooper, Endymion D.
  • D'Hondt, Sofie
  • De Clerck, Oliver
  • Delwiche, Charles F.
  • Fučíková, Karolina
  • Gurgel, Carlos F.D.
  • Lewis, Paul O.
  • Lopez-Bautista, Juan M.
  • Verbruggen, Heroen
issn
  • 2296-701X
number of pages
http://bibframe.org/vocab/doi
  • 10.3389/fevo.2014.00063
http://localhost/t...ganizacniJednotka
  • 11310
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