About: Enterococcus alcedinis sp. nov., isolated from common kingfisher (Alcedo atthis)

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About: Enterococcus alcedinis sp. nov., isolated from common kingfisher (Alcedo atthis) Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

Attributes	Values
rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	Two Gram-positive, catalase-negative bacterial strains were isolated from the cloaca of common kingfishers (Alcedo atthis). Repetitive sequence-based PCR fingerprinting using the (GTG)(5) primer grouped these isolates into a single cluster separated from all known enterococcal species. The two strains revealed identical 16S rRNA gene sequences placing them within the genus Enterococcus with Enterococcus aquimarinus LMG 16607(T) as the closest relative (97.14 % similarity). Further taxonomic investigation using sequencing of the genes for the superoxide dismutase (sodA), phenylalanyl-tRNA synthase alpha subunit (pheS) and the RNA polymerase alpha subunit (rpoA) as well as application of whole-cell protein fingerprinting, automated ribotyping and extensive phenotyping confirmed that both strains belong to the same species. Based on data from this polyphasic study, these strains represent a novel species of the genus Enterococcus, for which the name Enterococcus alcedinis sp. nov. is proposed. The type strain is L34(T) (=CCM 8433(T)=LMG 27164(T)). Two Gram-positive, catalase-negative bacterial strains were isolated from the cloaca of common kingfishers (Alcedo atthis). Repetitive sequence-based PCR fingerprinting using the (GTG)(5) primer grouped these isolates into a single cluster separated from all known enterococcal species. The two strains revealed identical 16S rRNA gene sequences placing them within the genus Enterococcus with Enterococcus aquimarinus LMG 16607(T) as the closest relative (97.14 % similarity). Further taxonomic investigation using sequencing of the genes for the superoxide dismutase (sodA), phenylalanyl-tRNA synthase alpha subunit (pheS) and the RNA polymerase alpha subunit (rpoA) as well as application of whole-cell protein fingerprinting, automated ribotyping and extensive phenotyping confirmed that both strains belong to the same species. Based on data from this polyphasic study, these strains represent a novel species of the genus Enterococcus, for which the name Enterococcus alcedinis sp. nov. is proposed. The type strain is L34(T) (=CCM 8433(T)=LMG 27164(T)). (en)
Title	Enterococcus alcedinis sp. nov., isolated from common kingfisher (Alcedo atthis) Enterococcus alcedinis sp. nov., isolated from common kingfisher (Alcedo atthis) (en)
skos:prefLabel	Enterococcus alcedinis sp. nov., isolated from common kingfisher (Alcedo atthis) Enterococcus alcedinis sp. nov., isolated from common kingfisher (Alcedo atthis) (en)
skos:notation	RIV/62157124:16810/13:43872421!RIV14-MSM-16810___
http://linked.open...avai/riv/aktivita	P
http://linked.open...avai/riv/aktivity	P(ED1.1.00/02.0068), P(EE2.3.20.0183)
http://linked.open...iv/cisloPeriodika	8
http://linked.open...vai/riv/dodaniDat	2014
http://linked.open...aciTvurceVysledku	Literák, Ivan
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Veterinární a farmaceutická univerzita Brno / Rektorát
http://linked.open...dnocenehoVysledku	72986
http://linked.open...ai/riv/idVysledku	RIV/62157124:16810/13:43872421
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	(GTG)(5)-PCR; rapid identification; deoxyribonucleic acid; performance liquid chromatography (en)
http://linked.open.../riv/klicoveSlovo	(GTG)(5)-PCR deoxyribonucleic acid performance liquid chromatography rapid identification
http://linked.open...odStatuVydavatele	GB - Spojené království Velké Británie a Severního Irska
http://linked.open...ontrolniKodProRIV	[DD3D1801A245]
http://linked.open...i/riv/nazevZdroje	International Journal of Systematic and Evolutionary Microbiology
http://linked.open...in/vavai/riv/obor	EE
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	9 (xsd:int)
http://linked.open...vavai/riv/projekt	Center of Experimental Biomedicine Central european institute of technology
http://linked.open...UplatneniVysledku	2013
http://linked.open...v/svazekPeriodika	63
http://linked.open...iv/tvurceVysledku	Frolková, Petra Literák, Ivan Sedláček, Ivo Švec, Pavel Mašlaňová, Ivana Černohlávková, Jitka Ghosh, Anuradha Zurek, Ludek Radiměřský, Tomáš
http://linked.open...ain/vavai/riv/wos	000330271400049
issn	1466-5026
number of pages	6 (xsd:int)
http://bibframe.org/vocab/doi	10.1099/ijs.0.049833-0
http://localhost/t...ganizacniJednotka	16810

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