About: A semi-automatic software tool for batch processing of yeast colony images

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About: A semi-automatic software tool for batch processing of yeast colony images Goto Sponge NotDistinct Permalink

An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	A software application for batch counting of yeast colonies in images of Petri dishes, based on the fast radial transform by Loy and Zelinsky, is introduced in the paper. The motivation to develop our own tool, was based on the requirement to reuse the imaging equipment already existing in the laboratory, as well as the possibility to adapt the ap- plication to the needs of the laboratory. The tool is designed to process image sets prepared beforehand in the darkroom and to automate the process of counting as much as possible. The tool operates either in a fully automatic mode, or provides an interactive editor for correction of the machine processing result. The performance of the tool has been evaluated using a test set of 245 images. The application is available for download or can be requested from the authors of the paper, in both cases free of charge. A software application for batch counting of yeast colonies in images of Petri dishes, based on the fast radial transform by Loy and Zelinsky, is introduced in the paper. The motivation to develop our own tool, was based on the requirement to reuse the imaging equipment already existing in the laboratory, as well as the possibility to adapt the ap- plication to the needs of the laboratory. The tool is designed to process image sets prepared beforehand in the darkroom and to automate the process of counting as much as possible. The tool operates either in a fully automatic mode, or provides an interactive editor for correction of the machine processing result. The performance of the tool has been evaluated using a test set of 245 images. The application is available for download or can be requested from the authors of the paper, in both cases free of charge. (en)
Title	A semi-automatic software tool for batch processing of yeast colony images A semi-automatic software tool for batch processing of yeast colony images (en)
skos:prefLabel	A semi-automatic software tool for batch processing of yeast colony images A semi-automatic software tool for batch processing of yeast colony images (en)
skos:notation	RIV/67985556:_____/11:00356817!RIV11-MSM-67985556
http://linked.open...avai/riv/aktivita	P Z
http://linked.open...avai/riv/aktivity	P(1M0567), Z(AV0Z10750506)
http://linked.open...vai/riv/dodaniDat	2011
http://linked.open...aciTvurceVysledku	Schier, Jan Kovář, Bohumil
http://linked.open.../riv/druhVysledku	D - Článek ve sborníku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Ústav teorie informace a automatizace AV ČR, v. v. i.
http://linked.open...dnocenehoVysledku	184133
http://linked.open...ai/riv/idVysledku	RIV/67985556:_____/11:00356817
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	yeast colonies; Petri dish; Image segmentation; Fast radial transform (en)
http://linked.open.../riv/klicoveSlovo	Fast radial transform Image segmentation Petri dish yeast colonies
http://linked.open...ontrolniKodProRIV	[F637D8874EEA]
http://linked.open...v/mistoKonaniAkce	Innsbruck
http://linked.open...i/riv/mistoVydani	Innsbruck
http://linked.open...i/riv/nazevZdroje	Proceedings of the Eighth IASTED International Conference on Signal Processing, Pattern Recognition, and Applications
http://linked.open...in/vavai/riv/obor	JC
http://linked.open...ichTvurcuVysledku	2 (xsd:int)
http://linked.open...cetTvurcuVysledku	2 (xsd:int)
http://linked.open...vavai/riv/projekt	Centre for Applied Cybernetics
http://linked.open...UplatneniVysledku	2011
http://linked.open...iv/tvurceVysledku	Kovář, Bohumil Schier, Jan
http://linked.open...vavai/riv/typAkce	WRD - Světová
http://linked.open.../riv/zahajeniAkce	2011-02-16 (xsd:date)
http://linked.open...n/vavai/riv/zamer	Pokročilé matematické metody získávání, zpracování a využití informací a znalostí ve složitých a nedeterministických systémech
number of pages	7 (xsd:int)
http://purl.org/ne...btex#hasPublisher	The International Association of Science and Technology for Development (IASTED)
https://schema.org/isbn	978-0-88986-865-6

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