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  • Detailed knowledge of interactions inside the proteins plays an important role in drug design. Experimental methods such as X-crystallography, NMR spectroscopy and neutron diffraction are typical experimental methods to analyze these interactions at atomic level [1]. These experimental methods can, in some cases, be complemented by molecular modeling methods. The molecular docking combined with flexible conformational search, molecular dynamics and quantum dynamics are the most used modeling methods at this time. Recently, the interactions of solvent molecules with cyclin dependent kinase (CDK2) using molecular dynamics were studied in our laboratory [2]. The study was extended to molecular dynamics with mixtured solvent (water molecules mixtured with small organic molecules) and also to utilization of systematic molecular docking of small organic molecules into CDK2 using CICADA [3, 4] program. The results of such calculations will be used. As a mixtured solvent water + dimethylether and water
  • Detailed knowledge of interactions inside the proteins plays an important role in drug design. Experimental methods such as X-crystallography, NMR spectroscopy and neutron diffraction are typical experimental methods to analyze these interactions at atomic level [1]. These experimental methods can, in some cases, be complemented by molecular modeling methods. The molecular docking combined with flexible conformational search, molecular dynamics and quantum dynamics are the most used modeling methods at this time. Recently, the interactions of solvent molecules with cyclin dependent kinase (CDK2) using molecular dynamics were studied in our laboratory [2]. The study was extended to molecular dynamics with mixtured solvent (water molecules mixtured with small organic molecules) and also to utilization of systematic molecular docking of small organic molecules into CDK2 using CICADA [3, 4] program. The results of such calculations will be used. As a mixtured solvent water + dimethylether and water (en)
  • Detailed knowledge of interactions inside the proteins plays an important role in drug design. Experimental methods such as X-crystallography, NMR spectroscopy and neutron diffraction are typical experimental methods to analyze these interactions at atomic level [1]. These experimental methods can, in some cases, be complemented by molecular modeling methods. The molecular docking combined with flexible conformational search, molecular dynamics and quantum dynamics are the most used modeling methods at this time. Recently, the interactions of solvent molecules with cyclin dependent kinase (CDK2) using molecular dynamics were studied in our laboratory [2]. The study was extended to molecular dynamics with mixtured solvent (water molecules mixtured with small organic molecules) and also to utilization of systematic molecular docking of small organic molecules into CDK2 using CICADA [3, 4] program. The results of such calculations will be used. As a mixtured solvent water + dimethylether and water (cs)
Title
  • Detailed study of interactions between small molecules and proteins using molecular modeling
  • Detailed study of interactions between small molecules and proteins using molecular modeling (en)
  • Detailed study of interactions between small molecules and proteins using molecular modeling (cs)
skos:prefLabel
  • Detailed study of interactions between small molecules and proteins using molecular modeling
  • Detailed study of interactions between small molecules and proteins using molecular modeling (en)
  • Detailed study of interactions between small molecules and proteins using molecular modeling (cs)
skos:notation
  • RIV/00216224:14310/04:00009965!RIV/2005/MSM/143105/N
http://linked.open.../vavai/riv/strany
  • 47-47
http://linked.open...avai/riv/aktivita
http://linked.open...avai/riv/aktivity
  • Z(MSM 143100005)
http://linked.open...vai/riv/dodaniDat
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http://linked.open...iv/duvernostUdaju
http://linked.open...titaPredkladatele
http://linked.open...dnocenehoVysledku
  • 559927
http://linked.open...ai/riv/idVysledku
  • RIV/00216224:14310/04:00009965
http://linked.open...riv/jazykVysledku
http://linked.open.../riv/klicovaSlova
  • Molecular dynamics, molecular docking, solvation (en)
http://linked.open.../riv/klicoveSlovo
http://linked.open...ontrolniKodProRIV
  • [FF8B957B720B]
http://linked.open...v/mistoKonaniAkce
  • Nové Hrady
http://linked.open...i/riv/mistoVydani
  • Praha
http://linked.open...i/riv/nazevZdroje
  • Materials in Structure Chemistry, Biology, Physics and Technology
http://linked.open...in/vavai/riv/obor
http://linked.open...ichTvurcuVysledku
http://linked.open...cetTvurcuVysledku
http://linked.open...UplatneniVysledku
http://linked.open...iv/tvurceVysledku
  • Koča, Jaroslav
  • Otyepka, Michal
  • Kříž, Zdeněk
  • Bártová, Iveta
http://linked.open...vavai/riv/typAkce
http://linked.open.../riv/zahajeniAkce
http://linked.open...n/vavai/riv/zamer
issn
  • 1211-5894
number of pages
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  • Krystalografická společnost
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  • 14310
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