About: The use of bioinfomatics to retrieve sequencing data of wheat and barley polymorphic DNAs for production of reliable DNA markers     Goto   Sponge   Distinct   Permalink

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  • The main objective of the project is to use and improve selected statistical and bioinformatics tools in order to produce, analyze, and integrate high-throughput genomic sequence data. This will allow understand better the biological systems in plants. Sequencing analysis is the most precise procedure that allows obtaining information on relation between the gene primary structure and corresponding phenotypic trait, which namely important in case of agricultural important crop species. We aim to employ available data on polymoprhisms of coding sequences in wheat to develop DNA markers derived from coding sequences associated with phenotypic traits. Such markers can be used directly for marker assisted selection and can serve as genotype/cultivar characteristics. Available data are incomplete and suffer from inaccuracy. More over wheat (T. aestivum L.) has a large genome (hexaploid) with over 90% of noncoding sequenced including pseudogenes. Within the project we intend to (1) analyze available data (en)
  • Cílem projektu je využít potenciál mezináordního kolektivu a aplikovat a zlepšit nástroje bioinformatiky pro analýzu sekvencí rostliného genomu a vývoj DNA markérů. Získat nové informace o sekvenační variabilitě alel a nové postupy na nich validovat. (cs)
Title
  • Využití nástrojů bioinformatiky pro hodnocení sekvenčních dat pšenice a ječmene pro vývoj spolehlivých molekulárních markerů. (cs)
  • The use of bioinfomatics to retrieve sequencing data of wheat and barley polymorphic DNAs for production of reliable DNA markers (en)
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  • bioinformatic; DNA sequences; barley; wheat; molecular marker (en)
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