About: Nucleosome Positioning by Sequence, State of the Art and Apparent Finale

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An Entity of Type : http://linked.opendata.cz/ontology/domain/vavai/Vysledek, within Data Space : linked.opendata.cz associated with source document(s)

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rdf:type	skos:Concept http://linked.opendata.cz/ontology/domain/vavai/Vysledek
Description	All major suggestions about the nucleosome positioning sequence pattern(s) are overviewed. Two basic binary periodical patterns are well established: in purine/pyrimidine alphabet YRRRRRYYYYYR and in strong/weak alphabet -SWWWWWSSSSSW. Their merger in four-letter alphabet sequence coincides with first ever complete matrix of nucleosome DNA bendability derived from very large database of nucleosome DNA sequences. Its simplified linear form is CGGAAATTTCCG. Several independent ways of derivation of the same pattern are described. It appears that the pattern represents an ultimate solution of long-standing problem of nucleosome positioning, and provides simple means for nucleosome mapping on sequences with single-base resolution. All major suggestions about the nucleosome positioning sequence pattern(s) are overviewed. Two basic binary periodical patterns are well established: in purine/pyrimidine alphabet YRRRRRYYYYYR and in strong/weak alphabet -SWWWWWSSSSSW. Their merger in four-letter alphabet sequence coincides with first ever complete matrix of nucleosome DNA bendability derived from very large database of nucleosome DNA sequences. Its simplified linear form is CGGAAATTTCCG. Several independent ways of derivation of the same pattern are described. It appears that the pattern represents an ultimate solution of long-standing problem of nucleosome positioning, and provides simple means for nucleosome mapping on sequences with single-base resolution. (en)
Title	Nucleosome Positioning by Sequence, State of the Art and Apparent Finale Nucleosome Positioning by Sequence, State of the Art and Apparent Finale (en)
skos:prefLabel	Nucleosome Positioning by Sequence, State of the Art and Apparent Finale Nucleosome Positioning by Sequence, State of the Art and Apparent Finale (en)
skos:notation	RIV/00216224:14310/10:00046000!RIV11-MSM-14310___
http://linked.open...avai/riv/aktivita	V Z
http://linked.open...avai/riv/aktivity	V, Z(MSM0021622415)
http://linked.open...iv/cisloPeriodika	6
http://linked.open...vai/riv/dodaniDat	2011
http://linked.open...aciTvurceVysledku	Trifonov, Eduard
http://linked.open.../riv/druhVysledku	J - Článek v odborném periodiku
http://linked.open...iv/duvernostUdaju	S - Úplné a pravdivé údaje nepodléhající ochraně podle zvláštních právních předpisů
http://linked.open...titaPredkladatele	Masarykova univerzita / Přírodovědecká fakulta
http://linked.open...dnocenehoVysledku	275567
http://linked.open...ai/riv/idVysledku	RIV/00216224:14310/10:00046000
http://linked.open...riv/jazykVysledku	eng - angličtina
http://linked.open.../riv/klicovaSlova	ANGSTROM RESOLUTION; CORE PARTICLE; DNA-SEQUENCE; NUCLEOTIDE-SEQUENCE; CHROMATIN DNA; C. ELEGANS; PAIR DNA; PATTERN; GENOME; DINUCLEOTIDES (en)
http://linked.open.../riv/klicoveSlovo	ANGSTROM RESOLUTION NUCLEOTIDE-SEQUENCE CORE PARTICLE C. ELEGANS DINUCLEOTIDES DNA-SEQUENCE PAIR DNA CHROMATIN DNA GENOME PATTERN
http://linked.open...odStatuVydavatele	US - Spojené státy americké
http://linked.open...ontrolniKodProRIV	[0864A11E565D]
http://linked.open...i/riv/nazevZdroje	JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS
http://linked.open...in/vavai/riv/obor	EB
http://linked.open...ichTvurcuVysledku	1 (xsd:int)
http://linked.open...cetTvurcuVysledku	1 (xsd:int)
http://linked.open...UplatneniVysledku	2010
http://linked.open...v/svazekPeriodika	27
http://linked.open...iv/tvurceVysledku	Trifonov, Eduard
http://linked.open...ain/vavai/riv/wos	000276276200003
http://linked.open...n/vavai/riv/zamer	Molecular basis of cell and tissue regulations
issn	0739-1102
number of pages	6 (xsd:int)
http://localhost/t...ganizacniJednotka	14310

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